Mercurial > repos > iuc > samtools_markdup

annotate test-data/stats.txt @ 3:d0a568e1904b draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
author iuc
date Tue, 28 Sep 2021 16:14:29 +0000
parents 83b8e36e9cbe
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
3
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
1 COMMAND: samtools markdup -@ 0 -s coordsort.sam /tmp/tmpea8lprdd/files/2/2/4/dataset_224df993-f6bf-4c7d-99a1-2e9dd51c2a57.dat
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
2 READ: 16
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
3 WRITTEN: 16
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
4 EXCLUDED: 3
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
5 EXAMINED: 13
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
6 PAIRED: 10
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
7 SINGLE: 3
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
8 DUPLICATE PAIR: 4
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
9 DUPLICATE SINGLE: 2
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
10 DUPLICATE PAIR OPTICAL: 0
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
11 DUPLICATE SINGLE OPTICAL: 0
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
12 DUPLICATE NON PRIMARY: 0
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
13 DUPLICATE NON PRIMARY OPTICAL: 0
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
14 DUPLICATE PRIMARY TOTAL: 6
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
15 DUPLICATE TOTAL: 6
d0a568e1904b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_markdup commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
iuc
parents: 1
diff changeset
16 ESTIMATED_LIBRARY_SIZE: 4