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comparison test-data/output_file2.tabular @ 16:6bd9ef49d013 draft

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planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd commit dfaab79252a858e8df16bbea3607ebf1b6962e5a
author mheinzl
date Mon, 08 Oct 2018 05:50:18 -0400
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15:32921a67437b 16:6bd9ef49d013
1 Values from family size distribution with all datasets
2
3 Family size Test_data Test_data2 Test_data3
4 FS=1 63 63 63
5 FS=2 5 5 5
6 FS=3 8 8 8
7 FS=4 10 10 10
8 FS=5 3 3 3
9 FS=6 5 5 5
10 FS=7 3 3 3
11 FS=8 3 3 3
12 FS=9 2 2 2
13 FS=10 3 3 3
14 FS=11 1 1 1
15 FS=12 6 6 6
16 sum 112 112 112
17 Dataset: Test_data
18 max. family size: 13
19 absolute frequency: 3
20 relative frequency: 0.027
21
22 singletons: family size > 20:
23 absolute nr. rel. freq absolute nr. rel. freq total length
24 Test_data 63 0.562 6 0.054 112
25
26 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
27 Whereas the total frequencies were calculated from the whole dataset (=including the DCS).
28
29 FS >= 1 unique: total:
30 nr./rel. freq of ab= 47 0.431 0.420
31 nr./rel. freq of ba= 59 0.488 0.476
32 nr./rel. freq of DCS (total)= 3 (6) 0.028 0.027 (0.054)
33 length of dataset= 109 109 112
34 FS >= 3 unique: total:
35 nr./rel. freq of ab= 14 0.341 0.318
36 nr./rel. freq of ba= 26 0.491 0.464
37 nr./rel. freq of DCS (total)= 1 (2) 0.037 0.023 (0.045)
38 length of dataset= 41 41 44
39
40 Values from family size distribution
41 duplex ab ba sum
42 FS=1 2 30 31 63
43 FS=2 0 3 2 5
44 FS=3 0 3 5 8
45 FS=4 2 3 5 10
46 FS=5 0 2 1 3
47 FS=6 0 1 4 5
48 FS=7 0 1 2 3
49 FS=8 0 1 2 3
50 FS=9 0 0 2 2
51 FS=10 1 1 1 3
52 FS=11 0 0 1 1
53 FS=12 1 2 3 6
54
55 Dataset: Test_data2
56 max. family size: 13
57 absolute frequency: 3
58 relative frequency: 0.027
59
60 singletons: family size > 20:
61 absolute nr. rel. freq absolute nr. rel. freq total length
62 Test_data2 63 0.562 6 0.054 112
63
64 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
65 Whereas the total frequencies were calculated from the whole dataset (=including the DCS).
66
67 FS >= 1 unique: total:
68 nr./rel. freq of ab= 47 0.431 0.420
69 nr./rel. freq of ba= 59 0.488 0.476
70 nr./rel. freq of DCS (total)= 3 (6) 0.028 0.027 (0.054)
71 length of dataset= 109 109 112
72 FS >= 3 unique: total:
73 nr./rel. freq of ab= 14 0.341 0.318
74 nr./rel. freq of ba= 26 0.491 0.464
75 nr./rel. freq of DCS (total)= 1 (2) 0.037 0.023 (0.045)
76 length of dataset= 41 41 44
77
78 Values from family size distribution
79 duplex ab ba sum
80 FS=1 2 30 31 63
81 FS=2 0 3 2 5
82 FS=3 0 3 5 8
83 FS=4 2 3 5 10
84 FS=5 0 2 1 3
85 FS=6 0 1 4 5
86 FS=7 0 1 2 3
87 FS=8 0 1 2 3
88 FS=9 0 0 2 2
89 FS=10 1 1 1 3
90 FS=11 0 0 1 1
91 FS=12 1 2 3 6
92
93 Dataset: Test_data3
94 max. family size: 13
95 absolute frequency: 3
96 relative frequency: 0.027
97
98 singletons: family size > 20:
99 absolute nr. rel. freq absolute nr. rel. freq total length
100 Test_data3 63 0.562 6 0.054 112
101
102 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS)
103 Whereas the total frequencies were calculated from the whole dataset (=including the DCS).
104
105 FS >= 1 unique: total:
106 nr./rel. freq of ab= 47 0.431 0.420
107 nr./rel. freq of ba= 59 0.488 0.476
108 nr./rel. freq of DCS (total)= 3 (6) 0.028 0.027 (0.054)
109 length of dataset= 109 109 112
110 FS >= 3 unique: total:
111 nr./rel. freq of ab= 14 0.341 0.318
112 nr./rel. freq of ba= 26 0.491 0.464
113 nr./rel. freq of DCS (total)= 1 (2) 0.037 0.023 (0.045)
114 length of dataset= 41 41 44
115
116 Values from family size distribution
117 duplex ab ba sum
118 FS=1 2 30 31 63
119 FS=2 0 3 2 5
120 FS=3 0 3 5 8
121 FS=4 2 3 5 10
122 FS=5 0 2 1 3
123 FS=6 0 1 4 5
124 FS=7 0 1 2 3
125 FS=8 0 1 2 3
126 FS=9 0 0 2 2
127 FS=10 1 1 1 3
128 FS=11 0 0 1 1
129 FS=12 1 2 3 6