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planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd commit dfaab79252a858e8df16bbea3607ebf1b6962e5a
| author | mheinzl |
|---|---|
| date | Mon, 08 Oct 2018 05:50:18 -0400 |
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Values from family size distribution with all datasets Family size Test_data Test_data2 Test_data3 FS=1 63 63 63 FS=2 5 5 5 FS=3 8 8 8 FS=4 10 10 10 FS=5 3 3 3 FS=6 5 5 5 FS=7 3 3 3 FS=8 3 3 3 FS=9 2 2 2 FS=10 3 3 3 FS=11 1 1 1 FS=12 6 6 6 sum 112 112 112 Dataset: Test_data max. family size: 13 absolute frequency: 3 relative frequency: 0.027 singletons: family size > 20: absolute nr. rel. freq absolute nr. rel. freq total length Test_data 63 0.562 6 0.054 112 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS) Whereas the total frequencies were calculated from the whole dataset (=including the DCS). FS >= 1 unique: total: nr./rel. freq of ab= 47 0.431 0.420 nr./rel. freq of ba= 59 0.488 0.476 nr./rel. freq of DCS (total)= 3 (6) 0.028 0.027 (0.054) length of dataset= 109 109 112 FS >= 3 unique: total: nr./rel. freq of ab= 14 0.341 0.318 nr./rel. freq of ba= 26 0.491 0.464 nr./rel. freq of DCS (total)= 1 (2) 0.037 0.023 (0.045) length of dataset= 41 41 44 Values from family size distribution duplex ab ba sum FS=1 2 30 31 63 FS=2 0 3 2 5 FS=3 0 3 5 8 FS=4 2 3 5 10 FS=5 0 2 1 3 FS=6 0 1 4 5 FS=7 0 1 2 3 FS=8 0 1 2 3 FS=9 0 0 2 2 FS=10 1 1 1 3 FS=11 0 0 1 1 FS=12 1 2 3 6 Dataset: Test_data2 max. family size: 13 absolute frequency: 3 relative frequency: 0.027 singletons: family size > 20: absolute nr. rel. freq absolute nr. rel. freq total length Test_data2 63 0.562 6 0.054 112 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS) Whereas the total frequencies were calculated from the whole dataset (=including the DCS). FS >= 1 unique: total: nr./rel. freq of ab= 47 0.431 0.420 nr./rel. freq of ba= 59 0.488 0.476 nr./rel. freq of DCS (total)= 3 (6) 0.028 0.027 (0.054) length of dataset= 109 109 112 FS >= 3 unique: total: nr./rel. freq of ab= 14 0.341 0.318 nr./rel. freq of ba= 26 0.491 0.464 nr./rel. freq of DCS (total)= 1 (2) 0.037 0.023 (0.045) length of dataset= 41 41 44 Values from family size distribution duplex ab ba sum FS=1 2 30 31 63 FS=2 0 3 2 5 FS=3 0 3 5 8 FS=4 2 3 5 10 FS=5 0 2 1 3 FS=6 0 1 4 5 FS=7 0 1 2 3 FS=8 0 1 2 3 FS=9 0 0 2 2 FS=10 1 1 1 3 FS=11 0 0 1 1 FS=12 1 2 3 6 Dataset: Test_data3 max. family size: 13 absolute frequency: 3 relative frequency: 0.027 singletons: family size > 20: absolute nr. rel. freq absolute nr. rel. freq total length Test_data3 63 0.562 6 0.054 112 The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS) Whereas the total frequencies were calculated from the whole dataset (=including the DCS). FS >= 1 unique: total: nr./rel. freq of ab= 47 0.431 0.420 nr./rel. freq of ba= 59 0.488 0.476 nr./rel. freq of DCS (total)= 3 (6) 0.028 0.027 (0.054) length of dataset= 109 109 112 FS >= 3 unique: total: nr./rel. freq of ab= 14 0.341 0.318 nr./rel. freq of ba= 26 0.491 0.464 nr./rel. freq of DCS (total)= 1 (2) 0.037 0.023 (0.045) length of dataset= 41 41 44 Values from family size distribution duplex ab ba sum FS=1 2 30 31 63 FS=2 0 3 2 5 FS=3 0 3 5 8 FS=4 2 3 5 10 FS=5 0 2 1 3 FS=6 0 1 4 5 FS=7 0 1 2 3 FS=8 0 1 2 3 FS=9 0 0 2 2 FS=10 1 1 1 3 FS=11 0 0 1 1 FS=12 1 2 3 6