Mercurial > repos > mheinzl > fsd
diff test-data/output_file2.tabular @ 16:6bd9ef49d013 draft
planemo upload for repository https://github.com/monikaheinzl/duplexanalysis_galaxy/tree/master/tools/fsd commit dfaab79252a858e8df16bbea3607ebf1b6962e5a
author | mheinzl |
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date | Mon, 08 Oct 2018 05:50:18 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output_file2.tabular Mon Oct 08 05:50:18 2018 -0400 @@ -0,0 +1,129 @@ +Values from family size distribution with all datasets + +Family size Test_data Test_data2 Test_data3 +FS=1 63 63 63 +FS=2 5 5 5 +FS=3 8 8 8 +FS=4 10 10 10 +FS=5 3 3 3 +FS=6 5 5 5 +FS=7 3 3 3 +FS=8 3 3 3 +FS=9 2 2 2 +FS=10 3 3 3 +FS=11 1 1 1 +FS=12 6 6 6 +sum 112 112 112 +Dataset: Test_data +max. family size: 13 +absolute frequency: 3 +relative frequency: 0.027 + + singletons: family size > 20: + absolute nr. rel. freq absolute nr. rel. freq total length +Test_data 63 0.562 6 0.054 112 + +The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS) +Whereas the total frequencies were calculated from the whole dataset (=including the DCS). + +FS >= 1 unique: total: +nr./rel. freq of ab= 47 0.431 0.420 +nr./rel. freq of ba= 59 0.488 0.476 +nr./rel. freq of DCS (total)= 3 (6) 0.028 0.027 (0.054) +length of dataset= 109 109 112 +FS >= 3 unique: total: +nr./rel. freq of ab= 14 0.341 0.318 +nr./rel. freq of ba= 26 0.491 0.464 +nr./rel. freq of DCS (total)= 1 (2) 0.037 0.023 (0.045) +length of dataset= 41 41 44 + +Values from family size distribution + duplex ab ba sum +FS=1 2 30 31 63 +FS=2 0 3 2 5 +FS=3 0 3 5 8 +FS=4 2 3 5 10 +FS=5 0 2 1 3 +FS=6 0 1 4 5 +FS=7 0 1 2 3 +FS=8 0 1 2 3 +FS=9 0 0 2 2 +FS=10 1 1 1 3 +FS=11 0 0 1 1 +FS=12 1 2 3 6 + +Dataset: Test_data2 +max. family size: 13 +absolute frequency: 3 +relative frequency: 0.027 + + singletons: family size > 20: + absolute nr. rel. freq absolute nr. rel. freq total length +Test_data2 63 0.562 6 0.054 112 + +The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS) +Whereas the total frequencies were calculated from the whole dataset (=including the DCS). + +FS >= 1 unique: total: +nr./rel. freq of ab= 47 0.431 0.420 +nr./rel. freq of ba= 59 0.488 0.476 +nr./rel. freq of DCS (total)= 3 (6) 0.028 0.027 (0.054) +length of dataset= 109 109 112 +FS >= 3 unique: total: +nr./rel. freq of ab= 14 0.341 0.318 +nr./rel. freq of ba= 26 0.491 0.464 +nr./rel. freq of DCS (total)= 1 (2) 0.037 0.023 (0.045) +length of dataset= 41 41 44 + +Values from family size distribution + duplex ab ba sum +FS=1 2 30 31 63 +FS=2 0 3 2 5 +FS=3 0 3 5 8 +FS=4 2 3 5 10 +FS=5 0 2 1 3 +FS=6 0 1 4 5 +FS=7 0 1 2 3 +FS=8 0 1 2 3 +FS=9 0 0 2 2 +FS=10 1 1 1 3 +FS=11 0 0 1 1 +FS=12 1 2 3 6 + +Dataset: Test_data3 +max. family size: 13 +absolute frequency: 3 +relative frequency: 0.027 + + singletons: family size > 20: + absolute nr. rel. freq absolute nr. rel. freq total length +Test_data3 63 0.562 6 0.054 112 + +The unique frequencies were calculated from the dataset where the tags occured only once (=ab without DCS, ba without DCS) +Whereas the total frequencies were calculated from the whole dataset (=including the DCS). + +FS >= 1 unique: total: +nr./rel. freq of ab= 47 0.431 0.420 +nr./rel. freq of ba= 59 0.488 0.476 +nr./rel. freq of DCS (total)= 3 (6) 0.028 0.027 (0.054) +length of dataset= 109 109 112 +FS >= 3 unique: total: +nr./rel. freq of ab= 14 0.341 0.318 +nr./rel. freq of ba= 26 0.491 0.464 +nr./rel. freq of DCS (total)= 1 (2) 0.037 0.023 (0.045) +length of dataset= 41 41 44 + +Values from family size distribution + duplex ab ba sum +FS=1 2 30 31 63 +FS=2 0 3 2 5 +FS=3 0 3 5 8 +FS=4 2 3 5 10 +FS=5 0 2 1 3 +FS=6 0 1 4 5 +FS=7 0 1 2 3 +FS=8 0 1 2 3 +FS=9 0 0 2 2 +FS=10 1 1 1 3 +FS=11 0 0 1 1 +FS=12 1 2 3 6