Mercurial > repos > shellac > sam_consensus_v3
comparison env/lib/python3.9/site-packages/galaxy/tool_util/deps/brew_util.py @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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-1:000000000000 | 0:4f3585e2f14b |
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1 """ brew_exts defines generic extensions to Homebrew this file | |
2 builds on those abstraction and provides Galaxy specific functionality | |
3 not useful to the brew external commands. | |
4 """ | |
5 from ..deps import brew_exts | |
6 | |
7 DEFAULT_TAP = "homebrew/science" | |
8 | |
9 | |
10 class HomebrewRecipe: | |
11 | |
12 def __init__(self, recipe, version, tap): | |
13 self.recipe = recipe | |
14 self.version = version | |
15 self.tap = tap | |
16 | |
17 | |
18 def requirements_to_recipes(requirements): | |
19 return filter(None, map(requirement_to_recipe, requirements)) | |
20 | |
21 | |
22 def requirement_to_recipe(requirement): | |
23 if requirement.type != "package": | |
24 return None | |
25 # TOOD: Allow requirements to annotate optionalbrew specific | |
26 # adaptions. | |
27 recipe_name = requirement.name | |
28 recipe_version = requirement.version | |
29 return HomebrewRecipe(recipe_name, recipe_version, tap=DEFAULT_TAP) | |
30 | |
31 | |
32 def requirements_to_recipe_contexts(requirements, brew_context): | |
33 def to_recipe_context(homebrew_recipe): | |
34 return brew_exts.RecipeContext( | |
35 homebrew_recipe.recipe, | |
36 homebrew_recipe.version, | |
37 brew_context | |
38 ) | |
39 return map(to_recipe_context, requirements_to_recipes(requirements)) |