osiris_phylogenetics: orthologs/ucsb_hamster/lib/wisecfg/pombe.gf annotate

annotate orthologs/ucsb_hamster/lib/wisecfg/pombe.gf @ 0:5b9a38ec4a39 draft default tip

First commit of old repositories

author	osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu>
date	Tue, 11 Mar 2014 12:19:13 -0700
parents
children

rev	line source
0 5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1 # Splice sites and intron regions information for GeneWise-21
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	2 # Fri May 15 13:20:38 IDT 1998
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	3 # Created by Mor Amitai (mor@compugen.co.il)
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	4 # dataset : ~/ftp/pub/PomBase/temp/cds_cdna ~/ftp/pub/PomBase/temp/cds_ex
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	5 # Consensi are read from top down. The value, for a sequence,
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	6 # is the number in the line of the first consensus that
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	7 # matches the sequence.
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	8 # Note: the set of sequences that are represented by a consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	9 # are all the sequences that match this consensus and none of the
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	10 # previous consensi
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	11 #
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	12 # the numbers in types 5SS, 3SS, CDS, and the emissions are the number of
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	13 # occurrences of each sequence in the database.
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	14 # In case of a consensus this is the number of occurrences of sequences
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	15 # that are represented by the consensus in the database divided by the
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	16 # number of sequences that are represented by the consensus.
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	17 # *stay_prob is the probability of the transition from the state to itself.
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	18 # No_Spacer_Prob is the probability of transition from Pyrimidine directly
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	19 # to 3SS (no spacer).
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	20 type 5SS
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	21 center 3
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	22 phase all
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	23 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	24 ---GTA-GT- 0.0869141
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	25 ---GT----- 0.000821553
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	26 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	27 type 5SS
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	28 center 3
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	29 phase 0
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	30 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	31 ---GTA-GT- 0.0371094
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	32 ---GT----- 0.000356523
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	33 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	34 type 5SS
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	35 center 3
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	36 phase 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	37 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	38 ---GTA-GT- 0.0292969
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	39 ---GT----- 0.000294519
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	40 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	41 type 5SS
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	42 center 3
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	43 phase 2
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	44 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	45 ---GT----- 0.000488281
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	46 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	47 type 5SS_codon
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	48 phase all
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	49 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	50 AAA 1.864078
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	51 AAC 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	52 AAG 6.524272
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	53 AAT 1.864078
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	54 AAN 2.71845
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	55 ACA 0.932039
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	56 ACC 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	57 ACG 1.553398
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	58 ACT 0.932039
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	59 ACN 0.932039
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	60 AGA 1.553398
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	61 AGC 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	62 AGG 1.553398
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	63 AGT 1.864078
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	64 AGN 1.32039
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	65 ATA 0.932039
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	66 ATC 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	67 ATG 2.796117
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	68 ATT 1.553398
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	69 ATN 1.47573
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	70 ANA 1.32039
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	71 ANC 0.46602
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	72 ANG 3.1068
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	73 ANT 1.5534
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	74 ANN 1.61165
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	75 CAA 1.242718
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	76 CAC 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	77 CAG 3.417476
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	78 CAT 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	79 CAN 1.39806
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	80 CCA 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	81 CCC 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	82 CCG 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	83 CCT 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	84 CCN 0.38835
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	85 CGA 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	86 CGC 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	87 CGG 1.242718
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	88 CGT 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	89 CGN 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	90 CTA 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	91 CTC 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	92 CTG 1.864078
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	93 CTT 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	94 CTN 0.776699
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	95 CNA 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	96 CNC 0.31068
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	97 CNG 1.78641
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	98 CNT 0.46602
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	99 CNN 0.796117
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	100 GAA 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	101 GAC 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	102 GAG 3.106796
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	103 GAT 1.242718
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	104 GAN 1.32039
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	105 GCA 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	106 GCC 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	107 GCG 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	108 GCT 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	109 GCN 0.543689
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	110 GGA 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	111 GGC 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	112 GGG 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	113 GGT 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	114 GGN 0.31068
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	115 GTA 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	116 GTC 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	117 GTG 0.932039
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	118 GTT 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	119 GTN 0.46602
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	120 GNA 0.38835
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	121 GNC 0.46602
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	122 GNG 1.16505
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	123 GNT 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	124 GNN 0.660194
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	125 TAA 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	126 TAC 0.932039
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	127 TAG 0.932039
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	128 TAT 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	129 TAN 0.776699
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	130 TCA 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	131 TCC 0.310680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	132 TCG 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	133 TCT 0.932039
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	134 TCN 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	135 TGA 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	136 TGC 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	137 TGG 1.242718
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	138 TGT 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	139 TGN 0.776699
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	140 TTA 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	141 TTC 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	142 TTG 3.106796
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	143 TTT 1.864078
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	144 TTN 1.5534
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	145 TNA 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	146 TNC 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	147 TNG 1.47573
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	148 TNT 1.00971
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	149 TNN 0.932039
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	150 NAA 1.00971
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	151 NAC 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	152 NAG 3.49515
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	153 NAT 1.08738
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	154 NAN 1.5534
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	155 NCA 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	156 NCC 0.38835
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	157 NCG 0.776699
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	158 NCT 0.699029
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	159 NCN 0.621359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	160 NGA 0.776699
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	161 NGC 0.38835
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	162 NGG 1.08738
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	163 NGT 0.776699
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	164 NGN 0.757282
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	165 NTA 0.543689
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	166 NTC 0.46602
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	167 NTG 2.17476
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	168 NTT 1.08738
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	169 NTN 1.06796
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	170 NNA 0.737864
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	171 NNC 0.46602
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	172 NNG 1.8835
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	173 NNT 0.912621
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	174 NNN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	175 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	176 type 5SS_codon
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	177 phase 0
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	178 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	179 AAA 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	180 AAC 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	181 AAG 6.144000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	182 AAT 1.536000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	183 AAN 2.176
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	184 ACA 1.024000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	185 ACC 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	186 ACG 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	187 ACT 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	188 ACN 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	189 AGA 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	190 AGC 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	191 AGG 1.536000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	192 AGT 1.024000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	193 AGN 0.896
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	194 ATA 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	195 ATC 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	196 ATG 2.048000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	197 ATT 1.536000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	198 ATN 1.152
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	199 ANA 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	200 ANC 0.512
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	201 ANG 2.56
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	202 ANT 1.152
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	203 ANN 1.216
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	204 CAA 1.024000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	205 CAC 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	206 CAG 4.608000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	207 CAT 1.024000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	208 CAN 1.792
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	209 CCA 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	210 CCC 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	211 CCG 1.024000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	212 CCT 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	213 CCN 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	214 CGA 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	215 CGC 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	216 CGG 1.024000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	217 CGT 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	218 CGN 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	219 CTA 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	220 CTC 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	221 CTG 1.536000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	222 CTT 1.024000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	223 CTN 0.896
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	224 CNA 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	225 CNC 0.512
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	226 CNG 2.048
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	227 CNT 0.768
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	228 CNN 0.992
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	229 GAA 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	230 GAC 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	231 GAG 4.096000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	232 GAT 1.536000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	233 GAN 1.664
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	234 GCA 1.024000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	235 GCC 1.024000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	236 GCG 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	237 GCT 1.024000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	238 GCN 0.896
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	239 GGA 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	240 GGC 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	241 GGG 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	242 GGT 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	243 GGN 0.512
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	244 GTA 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	245 GTC 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	246 GTG 1.536000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	247 GTT 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	248 GTN 0.768
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	249 GNA 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	250 GNC 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	251 GNG 1.664
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	252 GNT 0.896
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	253 GNN 0.96
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	254 TAA 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	255 TAC 1.536000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	256 TAG 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	257 TAT 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	258 TAN 0.768
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	259 TCA 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	260 TCC 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	261 TCG 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	262 TCT 1.536000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	263 TCN 0.768
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	264 TGA 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	265 TGC 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	266 TGG 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	267 TGT 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	268 TGN 0.512
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	269 TTA 1.024000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	270 TTC 0.512000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	271 TTG 2.048000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	272 TTT 1.536000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	273 TTN 1.28
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	274 TNA 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	275 TNC 0.768
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	276 TNG 0.896
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	277 TNT 1.024
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	278 TNN 0.832
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	279 NAA 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	280 NAC 0.768
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	281 NAG 3.84
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	282 NAT 1.152
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	283 NAN 1.6
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	284 NCA 0.768
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	285 NCC 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	286 NCG 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	287 NCT 0.896
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	288 NCN 0.736
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	289 NGA 0.512
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	290 NGC 0.512
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	291 NGG 0.896
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	292 NGT 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	293 NGN 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	294 NTA 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	295 NTC 0.512
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	296 NTG 1.792
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	297 NTT 1.152
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	298 NTN 1.024
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	299 NNA 0.64
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	300 NNC 0.608
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	301 NNG 1.792
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	302 NNT 0.96
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	303 NNN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	304 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	305 type 5SS_codon
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	306 phase 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	307 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	308 AAA 1.699115
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	309 AAC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	310 AAG 3.964602
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	311 AAT 1.132743
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	312 AAN 1.84071
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	313 ACA 1.132743
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	314 ACC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	315 ACG 2.265487
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	316 ACT 1.699115
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	317 ACN 1.41593
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	318 AGA 1.132743
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	319 AGC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	320 AGG 1.699115
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	321 AGT 1.132743
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	322 AGN 1.13274
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	323 ATA 1.699115
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	324 ATC 1.132743
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	325 ATG 2.831858
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	326 ATT 1.699115
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	327 ATN 1.84071
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	328 ANA 1.41593
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	329 ANC 0.707965
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	330 ANG 2.69027
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	331 ANT 1.41593
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	332 ANN 1.55752
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	333 CAA 1.132743
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	334 CAC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	335 CAG 1.132743
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	336 CAT 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	337 CAN 0.849557
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	338 CCA 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	339 CCC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	340 CCG 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	341 CCT 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	342 CCN 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	343 CGA 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	344 CGC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	345 CGG 1.699115
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	346 CGT 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	347 CGN 0.849558
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	348 CTA 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	349 CTC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	350 CTG 2.265487
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	351 CTT 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	352 CTN 0.991151
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	353 CNA 0.707965
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	354 CNC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	355 CNG 1.41593
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	356 CNT 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	357 CNN 0.814159
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	358 GAA 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	359 GAC 1.132743
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	360 GAG 1.699115
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	361 GAT 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	362 GAN 0.99115
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	363 GCA 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	364 GCC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	365 GCG 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	366 GCT 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	367 GCN 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	368 GGA 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	369 GGC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	370 GGG 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	371 GGT 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	372 GGN 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	373 GTA 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	374 GTC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	375 GTG 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	376 GTT 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	377 GTN 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	378 GNA 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	379 GNC 0.707965
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	380 GNG 0.849558
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	381 GNT 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	382 GNN 0.672567
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	383 TAA 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	384 TAC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	385 TAG 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	386 TAT 1.132743
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	387 TAN 0.707965
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	388 TCA 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	389 TCC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	390 TCG 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	391 TCT 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	392 TCN 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	393 TGA 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	394 TGC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	395 TGG 1.699115
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	396 TGT 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	397 TGN 0.849558
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	398 TTA 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	399 TTC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	400 TTG 3.964602
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	401 TTT 1.699115
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	402 TTN 1.69912
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	403 TNA 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	404 TNC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	405 TNG 1.69912
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	406 TNT 0.99115
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	407 TNN 0.955752
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	408 NAA 0.99115
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	409 NAC 0.707965
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	410 NAG 1.84071
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	411 NAT 0.849557
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	412 NAN 1.09735
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	413 NCA 0.707965
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	414 NCC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	415 NCG 0.991151
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	416 NCT 0.849558
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	417 NCN 0.778761
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	418 NGA 0.707965
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	419 NGC 0.566372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	420 NGG 1.41593
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	421 NGT 0.707965
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	422 NGN 0.849558
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	423 NTA 0.849558
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	424 NTC 0.707965
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	425 NTG 2.40708
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	426 NTT 1.13274
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	427 NTN 1.27434
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	428 NNA 0.814159
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	429 NNC 0.637168
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	430 NNG 1.66372
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	431 NNT 0.884956
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	432 NNN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	433 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	434 type 5SS_codon
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	435 phase 2
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	436 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	437 AAA 2.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	438 AAC 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	439 AAG 2.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	440 AAT 2.000000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	441 AAN 2.16667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	442 ACA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	443 ACC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	444 ACG 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	445 ACT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	446 ACN 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	447 AGA 2.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	448 AGC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	449 AGG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	450 AGT 2.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	451 AGN 1.66667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	452 ATA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	453 ATC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	454 ATG 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	455 ATT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	456 ATN 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	457 ANA 1.66667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	458 ANC 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	459 ANG 1.5
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	460 ANT 1.5
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	461 ANN 1.375
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	462 CAA 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	463 CAC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	464 CAG 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	465 CAT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	466 CAN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	467 CCA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	468 CCC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	469 CCG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	470 CCT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	471 CCN 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	472 CGA 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	473 CGC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	474 CGG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	475 CGT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	476 CGN 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	477 CTA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	478 CTC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	479 CTG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	480 CTT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	481 CTN 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	482 CNA 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	483 CNC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	484 CNG 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	485 CNT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	486 CNN 0.791667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	487 GAA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	488 GAC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	489 GAG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	490 GAT 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	491 GAN 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	492 GCA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	493 GCC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	494 GCG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	495 GCT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	496 GCN 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	497 GGA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	498 GGC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	499 GGG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	500 GGT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	501 GGN 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	502 GTA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	503 GTC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	504 GTG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	505 GTT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	506 GTN 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	507 GNA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	508 GNC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	509 GNG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	510 GNT 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	511 GNN 0.708334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	512 TAA 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	513 TAC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	514 TAG 2.000000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	515 TAT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	516 TAN 1.16667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	517 TCA 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	518 TCC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	519 TCG 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	520 TCT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	521 TCN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	522 TGA 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	523 TGC 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	524 TGG 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	525 TGT 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	526 TGN 1.33333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	527 TTA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	528 TTC 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	529 TTG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	530 TTT 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	531 TTN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	532 TNA 1.16667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	533 TNC 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	534 TNG 1.33333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	535 TNT 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	536 TNN 1.125
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	537 NAA 1.5
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	538 NAC 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	539 NAG 1.66667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	540 NAT 1.16667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	541 NAN 1.29167
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	542 NCA 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	543 NCC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	544 NCG 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	545 NCT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	546 NCN 0.791667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	547 NGA 1.5
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	548 NGC 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	549 NGG 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	550 NGT 1.33333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	551 NGN 1.125
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	552 NTA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	553 NTC 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	554 NTG 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	555 NTT 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	556 NTN 0.791667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	557 NNA 1.125
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	558 NNC 0.791667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	559 NNG 1.08333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	560 NNT 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	561 NNN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	562 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	563 type 3SS
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	564 center 3
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	565 phase all
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	566 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	567 TAG--- 1.64062
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	568 -AG--- 0.229167
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	569 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	570 type 3SS
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	571 center 3
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	572 phase 0
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	573 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	574 TAG--- 0.765625
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	575 -AG--- 0.09375
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	576 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	577 type 3SS
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	578 center 3
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	579 phase 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	580 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	581 TAG--- 0.515625
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	582 -AG--- 0.0885417
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	583 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	584 type 3SS
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	585 center 3
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	586 phase 2
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	587 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	588 -AG--- 0.125
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	589 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	590 type 3SS_codon
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	591 phase all
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	592 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	593 AAA 1.802817
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	594 AAC 1.502347
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	595 AAG 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	596 AAT 1.802817
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	597 AAN 1.35211
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	598 ACA 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	599 ACC 1.802817
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	600 ACG 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	601 ACT 0.901408
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	602 ACN 0.826291
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	603 AGA 0.600939
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	604 AGC 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	605 AGG 0.600939
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	606 AGT 1.502347
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	607 AGN 0.751173
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	608 ATA 1.502347
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	609 ATC 2.103286
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	610 ATG 1.502347
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	611 ATT 2.103286
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	612 ATN 1.80282
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	613 ANA 1.05164
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	614 ANC 1.42723
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	615 ANG 0.676056
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	616 ANT 1.57746
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	617 ANN 1.1831
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	618 CAA 2.103286
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	619 CAC 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	620 CAG 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	621 CAT 1.201878
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	622 CAN 0.976526
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	623 CCA 0.600939
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	624 CCC 0.600939
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	625 CCG 0.901408
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	626 CCT 0.600939
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	627 CCN 0.676056
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	628 CGA 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	629 CGC 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	630 CGG 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	631 CGT 0.901408
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	632 CGN 0.450704
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	633 CTA 0.901408
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	634 CTC 0.600939
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	635 CTG 1.201878
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	636 CTT 1.201878
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	637 CTN 0.976526
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	638 CNA 0.976526
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	639 CNC 0.450704
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	640 CNG 0.676056
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	641 CNT 0.976526
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	642 CNN 0.769953
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	643 GAA 1.802817
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	644 GAC 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	645 GAG 1.201878
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	646 GAT 2.403756
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	647 GAN 1.42723
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	648 GCA 0.901408
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	649 GCC 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	650 GCG 1.201878
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	651 GCT 1.502347
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	652 GCN 0.976526
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	653 GGA 0.901408
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	654 GGC 0.600939
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	655 GGG 0.600939
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	656 GGT 1.201878
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	657 GGN 0.826291
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	658 GTA 1.201878
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	659 GTC 1.502347
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	660 GTG 0.600939
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	661 GTT 1.502347
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	662 GTN 1.20188
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	663 GNA 1.20188
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	664 GNC 0.676056
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	665 GNG 0.901408
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	666 GNT 1.65258
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	667 GNN 1.10798
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	668 TAA 0.600939
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	669 TAC 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	670 TAG 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	671 TAT 1.502347
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	672 TAN 0.676056
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	673 TCA 1.201878
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	674 TCC 0.901408
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	675 TCG 0.901408
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	676 TCT 1.201878
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	677 TCN 1.05164
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	678 TGA 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	679 TGC 0.300469
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	680 TGG 0.901408
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	681 TGT 1.502347
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	682 TGN 0.751173
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	683 TTA 0.600939
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	684 TTC 0.600939
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	685 TTG 1.201878
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	686 TTT 2.704225
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	687 TTN 1.277
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	688 TNA 0.676056
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	689 TNC 0.525821
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	690 TNG 0.826291
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	691 TNT 1.7277
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	692 TNN 0.938967
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	693 NAA 1.57746
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	694 NAC 0.600939
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	695 NAG 0.525821
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	696 NAT 1.7277
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	697 NAN 1.10798
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	698 NCA 0.751173
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	699 NCC 0.901408
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	700 NCG 0.826291
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	701 NCT 1.05164
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	702 NCN 0.882629
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	703 NGA 0.525821
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	704 NGC 0.375587
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	705 NGG 0.600939
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	706 NGT 1.277
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	707 NGN 0.694835
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	708 NTA 1.05164
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	709 NTC 1.20188
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	710 NTG 1.12676
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	711 NTT 1.87793
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	712 NTN 1.31455
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	713 NNA 0.976526
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	714 NNC 0.769953
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	715 NNG 0.769953
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	716 NNT 1.48357
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	717 NNN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	718 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	719 type 3SS_codon
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	720 phase 0
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	721 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	722 AAA 1.465649
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	723 AAC 1.465649
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	724 AAG 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	725 AAT 1.954198
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	726 AAN 1.34351
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	727 ACA 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	728 ACC 1.954198
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	729 ACG 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	730 ACT 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	731 ACN 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	732 AGA 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	733 AGC 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	734 AGG 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	735 AGT 1.954198
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	736 AGN 0.854962
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	737 ATA 1.465649
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	738 ATC 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	739 ATG 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	740 ATT 1.465649
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	741 ATN 1.09924
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	742 ANA 0.9771
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	743 ANC 1.09924
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	744 ANG 0.610687
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	745 ANT 1.58779
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	746 ANN 1.0687
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	747 CAA 2.931298
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	748 CAC 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	749 CAG 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	750 CAT 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	751 CAN 1.22137
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	752 CCA 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	753 CCC 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	754 CCG 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	755 CCT 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	756 CCN 0.732824
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	757 CGA 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	758 CGC 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	759 CGG 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	760 CGT 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	761 CGN 0.48855
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	762 CTA 1.465649
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	763 CTC 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	764 CTG 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	765 CTT 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	766 CTN 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	767 CNA 1.46565
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	768 CNC 0.610687
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	769 CNG 0.48855
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	770 CNT 0.854962
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	771 CNN 0.854962
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	772 GAA 1.954198
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	773 GAC 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	774 GAG 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	775 GAT 2.931298
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	776 GAN 1.58779
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	777 GCA 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	778 GCC 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	779 GCG 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	780 GCT 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	781 GCN 0.732824
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	782 GGA 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	783 GGC 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	784 GGG 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	785 GGT 1.465649
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	786 GGN 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	787 GTA 1.465649
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	788 GTC 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	789 GTG 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	790 GTT 1.465649
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	791 GTN 1.09924
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	792 GNA 1.22137
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	793 GNC 0.732824
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	794 GNG 0.854962
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	795 GNT 1.58779
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	796 GNN 1.09924
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	797 TAA 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	798 TAC 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	799 TAG 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	800 TAT 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	801 TAN 0.610687
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	802 TCA 1.465649
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	803 TCC 1.465649
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	804 TCG 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	805 TCT 1.954198
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	806 TCN 1.46565
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	807 TGA 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	808 TGC 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	809 TGG 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	810 TGT 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	811 TGN 0.610687
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	812 TTA 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	813 TTC 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	814 TTG 0.488550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	815 TTT 2.931298
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	816 TTN 1.22137
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	817 TNA 0.854962
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	818 TNC 0.732825
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	819 TNG 0.732824
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	820 TNT 1.58779
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	821 TNN 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	822 NAA 1.70992
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	823 NAC 0.732825
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	824 NAG 0.610687
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	825 NAT 1.70992
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	826 NAN 1.19084
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	827 NCA 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	828 NCC 1.09924
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	829 NCG 0.732824
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	830 NCT 1.09924
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	831 NCN 0.977099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	832 NGA 0.48855
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	833 NGC 0.610687
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	834 NGG 0.732824
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	835 NGT 1.09924
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	836 NGN 0.732825
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	837 NTA 1.34351
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	838 NTC 0.732824
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	839 NTG 0.610687
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	840 NTT 1.70992
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	841 NTN 1.09924
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	842 NNA 1.12977
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	843 NNC 0.793893
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	844 NNG 0.671756
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	845 NNT 1.40458
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	846 NNN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	847 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	848 type 3SS_codon
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	849 phase 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	850 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	851 AAA 1.684211
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	852 AAC 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	853 AAG 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	854 AAT 1.684211
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	855 AAN 1.26316
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	856 ACA 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	857 ACC 1.684211
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	858 ACG 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	859 ACT 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	860 ACN 0.842106
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	861 AGA 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	862 AGC 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	863 AGG 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	864 AGT 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	865 AGN 0.842106
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	866 ATA 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	867 ATC 2.245614
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	868 ATG 2.245614
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	869 ATT 1.684211
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	870 ATN 1.82456
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	871 ANA 1.12281
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	872 ANC 1.40351
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	873 ANG 1.12281
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	874 ANT 1.12281
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	875 ANN 1.19298
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	876 CAA 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	877 CAC 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	878 CAG 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	879 CAT 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	880 CAN 0.701755
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	881 CCA 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	882 CCC 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	883 CCG 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	884 CCT 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	885 CCN 0.701755
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	886 CGA 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	887 CGC 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	888 CGG 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	889 CGT 1.684211
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	890 CGN 0.842106
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	891 CTA 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	892 CTC 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	893 CTG 2.245614
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	894 CTT 1.684211
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	895 CTN 1.26316
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	896 CNA 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	897 CNC 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	898 CNG 1.12281
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	899 CNT 1.26316
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	900 CNN 0.877193
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	901 GAA 1.684211
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	902 GAC 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	903 GAG 1.684211
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	904 GAT 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	905 GAN 1.26316
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	906 GCA 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	907 GCC 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	908 GCG 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	909 GCT 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	910 GCN 0.842105
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	911 GGA 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	912 GGC 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	913 GGG 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	914 GGT 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	915 GGN 0.842105
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	916 GTA 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	917 GTC 1.684211
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	918 GTG 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	919 GTT 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	920 GTN 1.26316
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	921 GNA 1.26316
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	922 GNC 0.842106
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	923 GNG 0.982457
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	924 GNT 1.12281
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	925 GNN 1.05263
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	926 TAA 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	927 TAC 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	928 TAG 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	929 TAT 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	930 TAN 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	931 TCA 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	932 TCC 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	933 TCG 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	934 TCT 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	935 TCN 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	936 TGA 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	937 TGC 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	938 TGG 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	939 TGT 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	940 TGN 0.842105
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	941 TTA 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	942 TTC 1.122807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	943 TTG 2.245614
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	944 TTT 2.245614
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	945 TTN 1.54386
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	946 TNA 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	947 TNC 0.701755
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	948 TNG 1.12281
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	949 TNT 1.12281
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	950 TNN 0.877193
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	951 NAA 1.12281
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	952 NAC 0.701755
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	953 NAG 0.842106
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	954 NAT 1.12281
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	955 NAN 0.947369
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	956 NCA 0.701755
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	957 NCC 0.842106
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	958 NCG 0.701755
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	959 NCT 0.701755
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	960 NCN 0.736842
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	961 NGA 0.842106
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	962 NGC 0.561404
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	963 NGG 0.842105
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	964 NGT 1.12281
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	965 NGN 0.842106
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	966 NTA 0.842106
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	967 NTC 1.40351
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	968 NTG 1.96491
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	969 NTT 1.68421
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	970 NTN 1.47368
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	971 NNA 0.877193
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	972 NNC 0.877193
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	973 NNG 1.08772
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	974 NNT 1.15789
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	975 NNN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	976 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	977 type 3SS_codon
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	978 phase 2
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	979 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	980 AAA 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	981 AAC 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	982 AAG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	983 AAT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	984 AAN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	985 ACA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	986 ACC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	987 ACG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	988 ACT 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	989 ACN 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	990 AGA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	991 AGC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	992 AGG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	993 AGT 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	994 AGN 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	995 ATA 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	996 ATC 2.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	997 ATG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	998 ATT 2.000000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	999 ATN 1.66667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1000 ANA 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1001 ANC 1.33333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1002 ANG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1003 ANT 1.33333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1004 ANN 1.08333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1005 CAA 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1006 CAC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1007 CAG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1008 CAT 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1009 CAN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1010 CCA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1011 CCC 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1012 CCG 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1013 CCT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1014 CCN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1015 CGA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1016 CGC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1017 CGG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1018 CGT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1019 CGN 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1020 CTA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1021 CTC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1022 CTG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1023 CTT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1024 CTN 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1025 CNA 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1026 CNC 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1027 CNG 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1028 CNT 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1029 CNN 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1030 GAA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1031 GAC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1032 GAG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1033 GAT 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1034 GAN 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1035 GCA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1036 GCC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1037 GCG 2.000000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1038 GCT 2.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1039 GCN 1.5
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1040 GGA 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1041 GGC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1042 GGG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1043 GGT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1044 GGN 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1045 GTA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1046 GTC 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1047 GTG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1048 GTT 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1049 GTN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1050 GNA 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1051 GNC 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1052 GNG 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1053 GNT 1.5
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1054 GNN 1.04167
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1055 TAA 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1056 TAC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1057 TAG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1058 TAT 2.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1059 TAN 1.33333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1060 TCA 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1061 TCC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1062 TCG 1.333333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1063 TCT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1064 TCN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1065 TGA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1066 TGC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1067 TGG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1068 TGT 2.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1069 TGN 1.16667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1070 TTA 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1071 TTC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1072 TTG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1073 TTT 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1074 TTN 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1075 TNA 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1076 TNC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1077 TNG 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1078 TNT 1.66667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1079 TNN 1.04167
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1080 NAA 1.16667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1081 NAC 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1082 NAG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1083 NAT 1.5
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1084 NAN 1.04167
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1085 NCA 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1086 NCC 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1087 NCG 1.33333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1088 NCT 1.33333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1089 NCN 1.08333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1090 NGA 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1091 NGC 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1092 NGG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1093 NGT 1.33333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1094 NGN 0.875
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1095 NTA 0.833333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1096 NTC 1.33333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1097 NTG 0.666667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1098 NTT 1.16667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1099 NTN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1100 NNA 0.916667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1101 NNC 0.916667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1102 NNG 0.833334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1103 NNT 1.33333
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1104 NNN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1105 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1106 type CDS
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1107 phase all
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1108 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1109 AAA 2.386335
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1110 AAC 1.053160
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1111 AAG 1.564912
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1112 AAT 1.686987
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1113 AAN 1.67285
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1114 ACA 0.987639
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1115 ACC 0.645552
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1116 ACG 0.588997
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1117 ACT 1.051091
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1118 ACN 0.81832
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1119 AGA 1.264206
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1120 AGC 0.831769
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1121 AGG 0.727625
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1122 AGT 0.865564
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1123 AGN 0.922291
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1124 ATA 0.993847
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1125 ATC 1.040746
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1126 ATG 1.394558
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1127 ATT 1.851134
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1128 ATN 1.32007
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1129 ANA 1.40801
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1130 ANC 0.892807
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1131 ANG 1.06902
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1132 ANT 1.36369
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1133 ANN 1.18338
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1134 CAA 1.498701
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1135 CAC 0.575203
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1136 CAG 0.708314
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1137 CAT 0.951086
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1138 CAN 0.933326
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1139 CCA 0.795215
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1140 CCC 0.491751
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1141 CCG 0.455887
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1142 CCT 0.832459
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1143 CCN 0.643828
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1144 CGA 0.706935
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1145 CGC 0.368985
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1146 CGG 0.354502
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1147 CGT 0.741419
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1148 CGN 0.54296
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1149 CTA 0.836597
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1150 CTC 0.861426
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1151 CTG 0.917980
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1152 CTT 1.436629
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1153 CTN 1.01316
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1154 CNA 0.959362
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1155 CNC 0.574341
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1156 CNG 0.609171
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1157 CNT 0.990398
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1158 CNN 0.783318
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1159 GAA 1.682160
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1160 GAC 0.641414
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1161 GAG 0.823493
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1162 GAT 1.255930
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1163 GAN 1.10075
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1164 GCA 0.793146
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1165 GCC 0.515890
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1166 GCG 0.364847
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1167 GCT 0.964880
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1168 GCN 0.659691
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1169 GGA 0.946258
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1170 GGC 0.470370
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1171 GGG 0.352433
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1172 GGT 0.846942
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1173 GGN 0.654001
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1174 GTA 0.737281
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1175 GTC 0.688313
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1176 GTG 0.724867
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1177 GTT 1.275931
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1178 GTN 0.856598
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1179 GNA 1.03971
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1180 GNC 0.578997
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1181 GNG 0.56641
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1182 GNT 1.08592
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1183 GNN 0.81776
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1184 TAA 1.130406
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1185 TAC 0.999364
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1186 TAG 0.591066
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1187 TAT 1.385592
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1188 TAN 1.02661
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1189 TCA 1.159373
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1190 TCC 0.921429
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1191 TCG 0.764179
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1192 TCT 1.205582
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1193 TCN 1.01264
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1194 TGA 1.487666
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1195 TGC 0.967638
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1196 TGG 1.180064
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1197 TGT 0.966949
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1198 TGN 1.15058
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1199 TTA 1.538704
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1200 TTC 1.455251
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1201 TTG 1.566981
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1202 TTT 2.128391
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1203 TTN 1.67233
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1204 TNA 1.32904
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1205 TNC 1.08592
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1206 TNG 1.02557
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1207 TNT 1.42163
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1208 TNN 1.21554
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1209 NAA 1.6744
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1210 NAC 0.817285
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1211 NAG 0.921946
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1212 NAT 1.3199
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1213 NAN 1.18338
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1214 NCA 0.933843
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1215 NCC 0.643655
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1216 NCG 0.543477
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1217 NCT 1.0135
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1218 NCN 0.78362
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1219 NGA 1.10127
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1220 NGC 0.65969
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1221 NGG 0.653656
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1222 NGT 0.855218
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1223 NGN 0.817458
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1224 NTA 1.02661
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1225 NTC 1.01143
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1226 NTG 1.1511
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1227 NTT 1.67302
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1228 NTN 1.21554
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1229 NNA 1.18403
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1230 NNC 0.783016
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1231 NNG 0.817544
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1232 NNT 1.21541
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1233 NNN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1234 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1235 type CDS
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1236 phase 0
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1237 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1238 AAA 2.488005
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1239 AAC 1.039424
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1240 AAG 1.727552
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1241 AAT 2.175971
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1242 AAN 1.85774
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1243 ACA 0.874108
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1244 ACC 0.690194
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1245 ACG 0.386426
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1246 ACT 1.630428
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1247 ACN 0.895289
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1248 AGA 0.702593
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1249 AGC 0.514546
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1250 AGG 0.276904
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1251 AGT 0.880307
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1252 AGN 0.593587
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1253 ATA 0.741855
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1254 ATC 0.721191
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1255 ATG 1.264667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1256 ATT 2.516935
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1257 ATN 1.31116
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1258 ANA 1.20164
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1259 ANC 0.741339
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1260 ANG 0.913887
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1261 ANT 1.80091
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1262 ANN 1.16444
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1263 CAA 1.702754
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1264 CAC 0.394692
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1265 CAG 0.702593
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1266 CAT 1.045623
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1267 CAN 0.961415
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1268 CCA 0.774918
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1269 CCC 0.566207
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1270 CCG 0.258306
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1271 CCT 1.444448
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1272 CCN 0.76097
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1273 CGA 0.481483
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1274 CGC 0.421556
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1275 CGG 0.171515
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1276 CGT 1.318395
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1277 CGN 0.598237
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1278 CTA 0.506280
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1279 CTC 0.477350
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1280 CTG 0.343031
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1281 CTT 1.657292
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1282 CTN 0.745988
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1283 CNA 0.866359
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1284 CNC 0.464951
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1285 CNG 0.368861
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1286 CNT 1.36644
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1287 CNN 0.766653
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1288 GAA 2.884763
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1289 GAC 1.039424
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1290 GAG 1.504375
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1291 GAT 2.576862
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1292 GAN 2.00136
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1293 GCA 1.004294
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1294 GCC 0.745988
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1295 GCG 0.291369
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1296 GCT 1.905266
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1297 GCN 0.986729
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1298 GGA 1.049756
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1299 GGC 0.599270
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1300 GGG 0.264506
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1301 GGT 1.582900
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1302 GGN 0.874108
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1303 GTA 0.762520
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1304 GTC 0.750121
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1305 GTG 0.495948
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1306 GTT 2.006522
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1307 GTN 1.00378
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1308 GNA 1.42533
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1309 GNC 0.783701
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1310 GNG 0.639049
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1311 GNT 2.01789
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1312 GNN 1.21649
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1313 TAA 0.000000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1314 TAC 0.770786
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1315 TAG 0.000000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1316 TAT 1.477511
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1317 TAN 0.562074
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1318 TCA 1.024959
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1319 TCC 0.772852
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1320 TCG 0.415356
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1321 TCT 1.826741
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1322 TCN 1.00998
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1323 TGA 0.000000
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1324 TGC 0.322366
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1325 TGG 0.588938
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1326 TGT 0.485616
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1327 TGN 0.34923
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1328 TTA 1.630428
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1329 TTC 0.907171
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1330 TTG 1.450647
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1331 TTT 1.965193
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1332 TTN 1.48836
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1333 TNA 0.663847
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1334 TNC 0.693294
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1335 TNG 0.613735
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1336 TNT 1.43877
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1337 TNN 0.85241
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1338 NAA 1.76888
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1339 NAC 0.811082
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1340 NAG 0.98363
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1341 NAT 1.81899
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1342 NAN 1.34565
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1343 NCA 0.91957
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1344 NCC 0.69381
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1345 NCG 0.337864
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1346 NCT 1.70172
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1347 NCN 0.913241
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1348 NGA 0.558458
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1349 NGC 0.464434
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1350 NGG 0.325466
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1351 NGT 1.0668
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1352 NGN 0.603791
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1353 NTA 0.910271
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1354 NTC 0.713958
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1355 NTG 0.888573
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1356 NTT 2.03649
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1357 NTN 1.13732
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1358 NNA 1.03929
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1359 NNC 0.670821
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1360 NNG 0.633883
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1361 NNT 1.656
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1362 NNN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1363 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1364 type CDS
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1365 phase 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1366 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1367 AAA 2.349249
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1368 AAC 1.177724
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1369 AAG 2.219080
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1370 AAT 1.330621
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1371 AAN 1.76917
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1372 ACA 1.167393
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1373 ACC 0.504148
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1374 ACG 0.816142
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1375 ACT 0.756223
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1376 ACN 0.810976
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1377 AGA 1.086812
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1378 AGC 0.979370
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1379 AGG 1.134334
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1380 AGT 0.735561
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1381 AGN 0.984019
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1382 ATA 1.694270
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1383 ATC 1.365747
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1384 ATG 2.539338
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1385 ATT 1.675674
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1386 ATN 1.81876
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1387 ANA 1.57443
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1388 ANC 1.00675
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1389 ANG 1.67722
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1390 ANT 1.12452
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1391 ANN 1.34573
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1392 CAA 1.200452
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1393 CAC 0.667377
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1394 CAG 1.028959
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1395 CAT 0.781017
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1396 CAN 0.919451
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1397 CCA 0.997966
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1398 CCC 0.456626
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1399 CCG 0.727296
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1400 CCT 0.595061
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1401 CCN 0.694237
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1402 CGA 0.435964
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1403 CGC 0.227280
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1404 CGG 0.378111
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1405 CGT 0.309927
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1406 CGN 0.337821
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1407 CTA 1.661211
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1408 CTC 1.413269
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1409 CTG 2.157094
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1410 CTT 1.576497
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1411 CTN 1.70202
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1412 CNA 1.0739
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1413 CNC 0.691138
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1414 CNG 1.07286
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1415 CNT 0.815626
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1416 CNN 0.913382
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1417 GAA 0.865730
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1418 GAC 0.384310
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1419 GAG 0.545472
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1420 GAT 0.440097
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1421 GAN 0.558902
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1422 GCA 0.615722
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1423 GCC 0.355383
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1424 GCG 0.475222
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1425 GCT 0.411170
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1426 GCN 0.464374
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1427 GGA 0.407038
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1428 GGC 0.245876
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1429 GGG 0.334722
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1430 GGT 0.314060
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1431 GGN 0.325424
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1432 GTA 1.076481
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1433 GTC 0.791348
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1434 GTG 1.504181
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1435 GTT 0.894657
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1436 GTN 1.06667
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1437 GNA 0.741243
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1438 GNC 0.444229
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1439 GNG 0.714899
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1440 GNT 0.514996
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1441 GNN 0.603842
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1442 TAA 1.140533
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1443 TAC 0.768620
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1444 TAG 0.964907
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1445 TAT 0.766554
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1446 TAN 0.910154
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1447 TCA 0.896723
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1448 TCC 0.595061
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1449 TCG 0.760355
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1450 TCT 0.603325
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1451 TCN 0.713866
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1452 TGA 1.037224
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1453 TGC 0.665311
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1454 TGG 1.208717
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1455 TGT 0.640517
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1456 TGN 0.887942
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1457 TTA 1.993866
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1458 TTC 1.686005
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1459 TTG 2.652978
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1460 TTT 1.812042
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1461 TTN 2.03622
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1462 TNA 1.26709
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1463 TNC 0.928749
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1464 TNG 1.39674
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1465 TNT 0.95561
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1466 TNN 1.13705
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1467 NAA 1.38899
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1468 NAC 0.749508
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1469 NAG 1.1896
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1470 NAT 0.829572
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1471 NAN 1.03942
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1472 NCA 0.919451
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1473 NCC 0.477804
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1474 NCG 0.694754
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1475 NCT 0.591445
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1476 NCN 0.670863
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1477 NGA 0.741759
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1478 NGC 0.529459
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1479 NGG 0.763971
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1480 NGT 0.500016
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1481 NGN 0.633801
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1482 NTA 1.60646
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1483 NTC 1.31409
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1484 NTG 2.2134
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1485 NTT 1.48972
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1486 NTN 1.65592
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1487 NNA 1.16416
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1488 NNC 0.767716
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1489 NNG 1.21543
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1490 NNT 0.852688
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1491 NNN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1492 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1493 type CDS
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1494 phase 2
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1495 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1496 AAA 2.316265
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1497 AAC 0.942210
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1498 AAG 0.745916
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1499 AAT 1.551753
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1500 AAN 1.38904
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1501 ACA 0.921547
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1502 ACC 0.743850
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1503 ACG 0.566152
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1504 ACT 0.766578
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1505 ACN 0.749532
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1506 AGA 2.002195
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1507 AGC 1.002131
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1508 AGG 0.772777
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1509 AGT 0.981468
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1510 AGN 1.18964
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1511 ATA 0.545490
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1512 ATC 1.035191
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1513 ATG 0.378124
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1514 ATT 1.357526
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1515 ATN 0.829083
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1516 ANA 1.44637
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1517 ANC 0.930845
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1518 ANG 0.615742
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1519 ANT 1.16433
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1520 ANN 1.03932
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1521 CAA 1.591012
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1522 CAC 0.665332
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1523 CAG 0.394654
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1524 CAT 1.026926
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1525 CAN 0.919481
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1526 CCA 0.613676
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1527 CCC 0.454575
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1528 CCG 0.384322
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1529 CCT 0.458707
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1530 CCN 0.47782
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1531 CGA 1.204623
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1532 CGC 0.460774
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1533 CGG 0.516562
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1534 CGT 0.597146
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1535 CGN 0.694776
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1536 CTA 0.342997
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1537 CTC 0.694260
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1538 CTG 0.254149
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1539 CTT 1.074450
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1540 CTN 0.591464
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1541 CNA 0.938077
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1542 CNC 0.568735
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1543 CNG 0.387422
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1544 CNT 0.789307
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1545 CNN 0.670885
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1546 GAA 1.293472
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1547 GAC 0.502099
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1548 GAG 0.421515
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1549 GAT 0.750048
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1550 GAN 0.741783
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1551 GCA 0.760380
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1552 GCC 0.448376
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1553 GCG 0.330600
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1554 GCT 0.578550
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1555 GCN 0.529477
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1556 GGA 1.382321
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1557 GGC 0.568219
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1558 GGG 0.460774
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1559 GGT 0.644670
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1560 GGN 0.763996
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1561 GTA 0.373991
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1562 GTC 0.524827
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1563 GTG 0.175631
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1564 GTT 0.925680
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1565 GTN 0.500032
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1566 GNA 0.952541
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1567 GNC 0.51088
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1568 GNG 0.34713
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1569 GNT 0.724737
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1570 GNN 0.633822
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1571 TAA 2.248079
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1572 TAC 1.458772
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1573 TAG 0.807903
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1574 TAT 1.911280
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1575 TAN 1.60651
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1576 TCA 1.555886
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1577 TCC 1.396784
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1578 TCG 1.117841
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1579 TCT 1.186027
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1580 TCN 1.31413
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1581 TGA 3.421709
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1582 TGC 1.915413
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1583 TGG 1.741848
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1584 TGT 1.774908
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1585 TGN 2.21347
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1586 TTA 0.989733
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1587 TTC 1.770775
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1588 TTG 0.595080
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1589 TTT 2.603474
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1590 TTN 1.48977
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1591 TNA 2.05385
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1592 TNC 1.63544
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1593 TNG 1.06567
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1594 TNT 1.86892
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1595 TNN 1.65597
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1596 NAA 1.86221
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1597 NAC 0.892103
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1598 NAG 0.592497
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1599 NAT 1.31
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1600 NAN 1.1642
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1601 NCA 0.962872
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1602 NCC 0.760896
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1603 NCG 0.599729
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1604 NCT 0.747465
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1605 NCN 0.767741
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1606 NGA 2.00271
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1607 NGC 0.986634
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1608 NGG 0.87299
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1609 NGT 0.999548
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1610 NGN 1.21547
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1611 NTA 0.563053
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1612 NTC 1.00626
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1613 NTG 0.350746
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1614 NTT 1.49028
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1615 NTN 0.852586
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1616 NNA 1.34771
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1617 NNC 0.911474
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1618 NNG 0.603991
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1619 NNT 1.13682
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1620 NNN 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1621 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1622 type Intron_Corr_Term
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1623 phase all
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1624 225.12
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1625 type Intron_Corr_Term
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1626 phase 0
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1627 524.049
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1628 type Intron_Corr_Term
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1629 phase 1
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1630 652.388
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1631 type Intron_Corr_Term
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1632 phase 2
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1633 998.969
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1634 type Intron_emission
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1635 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1636 A 1.233115
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1637 C 0.595593
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1638 G 0.670399
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1639 T 1.500893
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1640 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1641 type Pyrimidine_emission
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1642 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1643 A 0.261549
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1644 C 0.869936
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1645 G 0.127932
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1646 T 2.740583
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1647 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1648 type Spacer_emission
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1649 begin consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1650 A 1.495231
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1651 C 0.607484
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1652 G 0.513573
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1653 T 1.383712
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1654 end consensus
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1655 type Intron_Stay_Prob
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1656 0.988929
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1657 type Central_Intron_Stay_Prob
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1658 0.983466
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1659 type Pyrimidine_Stay_Prob
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1660 0.904578
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1661 type No_Spacer_Prob
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1662 0.0743243
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1663 type Spacer_Stay_Prob
5b9a38ec4a39 First commit of old repositories osiris_phylogenetics <ucsb_phylogenetics@lifesci.ucsb.edu> parents: diff changeset	1664 0.952081

Mercurial > repos > ucsb-phylogenetics > osiris_phylogenetics

annotate orthologs/ucsb_hamster/lib/wisecfg/pombe.gf @ 0:5b9a38ec4a39 draft default tip