Mercurial > repos > vimalkumarvelayudhan > riboplot
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Use latest version of riboplot from PyPI (0.2.4)
author | Vimalkumar Velayudhan <vimalkumarvelayudhan@gmail.com> |
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date | Wed, 25 Nov 2015 13:04:01 +0000 |
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1 RiboPlot |
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2 ======== |
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3 RiboPlot includes programs to plot and output Ribo-Seq read counts from an alignment file (BAM format). |
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4 |
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5 There are two programs in the package: |
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Vimalkumar Velayudhan <vimal@biotechcoder.com>
parents:
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6 |
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7 **riboplot** |
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8 |
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9 Plot and output read counts (csv) for a single transcript. |
628f82e72d72
Version as released on PyPI 0.1.0
Vimalkumar Velayudhan <vimal@biotechcoder.com>
parents:
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10 |
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Version as released on PyPI 0.1.0
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11 **ribocount** |
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13 Output read counts for all transcripts in an alignment. |
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14 |
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15 Free software: GPL license |
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17 Documentation: http://pythonhosted.org/riboplot. |
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18 |
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Use latest version of riboplot from PyPI (0.2.3)
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19 PyPI: https://pypi.python.org/pypi/riboplot. |
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parents:
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21 Github Repository: https://github.com/vimalkvn/riboplot. |
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parents:
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22 |
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Use latest version of riboplot from PyPI (0.2.3)
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parents:
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23 Online: http://ribogalaxy.ucc.ie (under RiboSeq Analysis/RiboPlot). |
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24 |
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Working install (virtualenv)
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25 .. note:: |
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Working install (virtualenv)
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27 Matplotlib installation requires freetype headers and libraries installed |
42fe64cac818
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parents:
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28 (``libfreetype6-dev`` on Ubuntu 14.04). |
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29 |