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Repository dr_disco
Name: dr_disco
Owner: erasmus-medical-center
Synopsis: Dr. Disco: fusion gene breakpoint detection in total RNA-seq data
Detects and classifies exon-to-exon and genomic breakpoints of fusion genes in total RNA-seq data using a Graph data structure.
Development repository: https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco
Link to this repository: https://toolshed.g2.bx.psu.edu/view/erasmus-medical-center/dr_disco/3743fd602fa9
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/erasmus-medical-center/dr_disco
Type: unrestricted
Revision: 11:3743fd602fa9
This revision can be installed: True
Times cloned / installed: 713

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Extracts reads from two targeted regions 0.14.0 16.01
Merges corresponding genomic breaks and exon-to-exon junctions 0.14.0 16.01
Classifies detected break-points in RNA-seq based on corresponding statistics and blacklists 0.14.0 16.01
Fixes chimeric alignments from STAR 0.14.0 16.01
Detects break-points in RNA-seq 0.14.0 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Transcriptomics - Tools for use in the study of Transcriptomics.